STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIB2Tribbles pseudokinase 2. (343 aa)    
Predicted Functional Partners:
COP1
COP1 E3 ubiquitin ligase.
    
 
 0.742
OVCH2
Ovochymase 2 (gene/pseudogene); Belongs to the peptidase S1 family.
    
 
 0.697
NT5DC1
5'-nucleotidase domain containing 1.
      
 0.695
DTX3
Deltex E3 ubiquitin ligase 3.
   
 
 0.678
PRKAB1
Protein kinase AMP-activated non-catalytic subunit beta 1.
   
 0.639
PRKAB2
Protein kinase AMP-activated non-catalytic subunit beta 2.
   
 0.635
ACACA
Acetyl-CoA carboxylase alpha.
    
 
 0.595
RIPK4
Receptor interacting serine/threonine kinase 4.
    
 0.583
PRKAG1
Protein kinase AMP-activated non-catalytic subunit gamma 1.
   
 0.579
PRKAG2
Protein kinase AMP-activated non-catalytic subunit gamma 2.
   
 0.579
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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