Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HOMEZHomeobox and leucine zipper encoding. (656 aa)    
Predicted Functional Partners:
LRIT1
Leucine rich repeat, Ig-like and transmembrane domains 1.
    
 0.654
CMYA5
Cardiomyopathy associated 5.
  
 
 0.514
SMYD1
SET and MYND domain containing 1.
   
  0.514
TBC1D31
TBC1 domain family member 31.
    
 0.503
DCP1B
Decapping mRNA 1B.
    
 
 0.473
ZHX3
Zinc fingers and homeoboxes 3.
    
 
 0.456
FAM83A
Family with sequence similarity 83 member A.
      
 0.448
RPL7L1
Ribosomal protein L7 like 1.
    
 0.447
C13H16orf72
Chromosome 13 C16orf72 homolog.
      
 0.431
BARHL1
BarH like homeobox 1.
    
 0.421
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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