STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VEPH1Ventricular zone expressed PH domain containing 1. (833 aa)    
Predicted Functional Partners:
CCDC117
Coiled-coil domain containing 117.
      
 0.830
MEGF11
Multiple EGF like domains 11.
      
 0.753
SLC16A4
Solute carrier family 16 member 4.
      
 0.704
GYPC
4.1m domain-containing protein.
      
 0.698
LOC100061763
Uncharacterized protein.
      
 0.675
MSANTD4
Myb/SANT DNA binding domain containing 4 with coiled-coils.
      
 0.649
F5
Coagulation factor V; Belongs to the multicopper oxidase family.
      
 0.636
C2H4orf45
Chromosome 2 C4orf45 homolog.
      
 0.556
LRRC4
Leucine rich repeat containing 4.
      
 0.489
EXOC5
Exocyst complex component 5.
   
  
 0.480
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.