STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100069564Uncharacterized protein. (2001 aa)    
Predicted Functional Partners:
NUP62
Nucleoporin 62.
   
    0.554
NUP62CL
Nucleoporin 62 C-terminal like.
   
    0.553
PLEKHG7
Pleckstrin homology and RhoGEF domain containing G7.
   
  
 0.495
DUSP22
Dual specificity phosphatase 22; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.
   
  
 0.476
WDFY3
WD repeat and FYVE domain containing 3.
      
 0.473
RIMS2
Regulating synaptic membrane exocytosis 2.
   
  
 0.447
SLC17A8
Solute carrier family 17 member 8.
     
 0.439
PCMTD1
Protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1.
      
 0.431
VAMP2
V-SNARE coiled-coil homology domain-containing protein.
     
 0.408
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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