STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTC39CTetratricopeptide repeat domain 39C. (582 aa)    
Predicted Functional Partners:
RAB30
Ras-related protein Rab-30-like protein.
      
 0.800
TLE1
TLE family member 1, transcriptional corepressor.
      
 0.688
ELOVL5
Elongation of very long chain fatty acids protein.
      
 0.676
MKNK1
MAPK interacting serine/threonine kinase 1; Belongs to the protein kinase superfamily.
      
 0.649
TP53INP1
Tumor protein p53 inducible nuclear protein 1.
      
 0.632
THEM4
Thioesterase superfamily member 4.
      
 0.631
FKBP5
Peptidylprolyl isomerase.
      
 0.536
TTC4
Tetratricopeptide repeat domain 4.
   
  
 0.484
TMEM19
Transmembrane protein 19.
   
  
 0.481
CYP39A1
Cytochrome P450 family 39 subfamily A member 1; Belongs to the cytochrome P450 family.
   
  
 0.478
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.