STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAPN15Calpain 15; Belongs to the peptidase C2 family. (1148 aa)    
Predicted Functional Partners:
ZSCAN31
Zinc finger and SCAN domain containing 31.
   
 0.770
CAPNS1
Calpain small subunit 1.
   
 0.748
CAST
Calpastatin.
   
 0.672
ADGRB2
Adhesion G protein-coupled receptor B2; Belongs to the G-protein coupled receptor 2 family.
   
  
 0.628
RERG
RAS like estrogen regulated growth inhibitor.
     
 0.566
ITSN2
Intersectin 2.
   
 
  0.532
EGR2
Early growth response 2.
   
 0.529
ANKRD49
Ankyrin repeat domain 49.
    
 0.526
FOSL1
FOS like 1, AP-1 transcription factor subunit.
   
  
 0.523
MAMLD1
Mastermind like domain containing 1.
    
 
 0.498
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.