STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HDGFHeparin binding growth factor. (254 aa)    
Predicted Functional Partners:
MDK
Uncharacterized protein.
      
 0.700
PTN
Pleiotrophin.
   
  
 0.588
SMYD1
SET and MYND domain containing 1.
   
 
 0.557
POGZ
Pogo transposable element derived with ZNF domain.
    
 
 0.479
ALYREF
Aly/REF export factor.
   
 
 0.477
CDK13
Cyclin dependent kinase 13.
   
 
 0.474
CDK12
Cyclin dependent kinase 12.
    
 
 0.461
FGF2
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
    
 
 0.446
ZFP57
ZFP57 zinc finger protein.
    
 
 0.401
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.