STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSTKPhosphoseryl-tRNA kinase. (358 aa)    
Predicted Functional Partners:
SEPSECS
O-phosphoseryl-tRNA(Sec) selenium transferase; Converts O-phosphoseryl-tRNA(Sec) to selenocysteinyl- tRNA(Sec) required for selenoprotein biosynthesis.
   
 
 0.994
SARS1
Seryl-tRNA synthetase.
     
 0.984
SEPHS1
Selenophosphate synthetase 1.
   
  
 0.942
SECISBP2
SECIS binding protein 2.
      
 0.909
EEFSEC
Eukaryotic elongation factor, selenocysteine-tRNA specific.
      
 0.905
SELENOK
Uncharacterized protein.
   
  
 0.723
SELENOF
Sep15_SelM domain-containing protein.
   
  
 0.685
SELENOS
Selenoprotein S.
   
  
 0.673
SELENOH
Uncharacterized protein.
   
  
 0.673
SELENON
Selenoprotein N.
      
 0.646
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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