STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIPR1EARP complex and GARP complex interacting protein 1. (387 aa)    
Predicted Functional Partners:
VPS53
VPS53 subunit of GARP complex.
   
 0.929
VPS54
VPS54 subunit of GARP complex.
    
 0.908
VPS52
VPS52 subunit of GARP complex.
    
 0.892
VPS51
VPS51 subunit of GARP complex.
   
 0.885
VPS50
VPS50 subunit of EARP/GARPII complex.
   
 0.873
CCDC186
Coiled-coil domain containing 186.
      
 0.841
CPD
Carboxypeptidase D.
      
 0.829
PICK1
Protein interacting with PRKCA 1.
      
 0.715
ENGASE
Endo-beta-N-acetylglucosaminidase.
   
  
 0.701
RAB10
RAB10, member RAS oncogene family.
    
 
 0.685
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.