STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC25A42Solute carrier family 25 member 42; Belongs to the mitochondrial carrier (TC 2.A.29) family. (318 aa)    
Predicted Functional Partners:
RPL18
Ribosomal protein L18.
 
 
    0.900
LOC100064378
Ribosomal_L18e/L15P domain-containing protein.
 
 
    0.898
TYMS
Thymidylate synthetase.
  
 0.806
RRM1
Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
  
 
 0.761
PCNA
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
  
 0.739
CENPK
Centromere protein K.
   
 0.716
RFC3
Replication factor C subunit 3.
   
  
 0.689
CENPN
Centromere protein N.
   
 0.674
CENPM
Centromere protein M.
   
 0.671
SLC25A53
Solute carrier family 25 member 53; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.635
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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