STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRDM10PR/SET domain 10. (1127 aa)    
Predicted Functional Partners:
SORBS3
Sorbin and SH3 domain containing 3.
      
 0.771
RIPK4
Receptor interacting serine/threonine kinase 4.
    
 0.758
MLXIPL
MLX interacting protein like.
    
 
 0.742
NRG2
Neuregulin 2.
   
 0.612
NRG4
Neuregulin 4.
    
 0.584
PLAC8L1
PLAC8 like 1.
    
 0.581
FAM172A
Family with sequence similarity 172 member A.
   
  
 0.546
KCNMA1
Potassium calcium-activated channel subfamily M alpha 1.
      
 0.540
UCK2
Uridine-cytidine kinase; Belongs to the uridine kinase family.
    
 0.521
MAD2L1
Mitotic arrest deficient 2 like 1.
    
 
 0.520
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.