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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USHBP1USH1 protein network component harmonin binding protein 1. (700 aa)    
Predicted Functional Partners:
ZBTB25
Zinc finger and BTB domain containing 25.
      
 0.902
ZMAT4
Zinc finger matrin-type 4.
      
 0.850
GMCL1
BTB domain-containing protein.
    
 
 0.837
KPNA6
Importin subunit alpha; Functions in nuclear protein import.
      
 0.801
MMRN2
Multimerin 2.
   
  
 0.790
KPNA1
Importin subunit alpha; Functions in nuclear protein import.
   
  
 0.742
KCTD9
Potassium channel tetramerization domain containing 9.
   
  
 0.652
MAGED1
MAGE family member D1.
      
 0.647
MLH1
MutL homolog 1.
   
  
 0.637
NEO1
Neogenin 1.
   
 0.568
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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