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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHRDL1Chordin like 1. (521 aa)    
Predicted Functional Partners:
BMP4
Bone morphogenetic protein 4.
    
 0.684
OSGEPL1
Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in mitochondrial tRNAs that read codons beginning with adenine. Probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. Involved in mitochondrial genome maintenance.
      
 0.635
PLXDC2
Plexin domain containing 2.
      
 0.585
MAGEH1
MAGE family member H1.
    
 
 0.581
BMP2
Bone morphogenetic protein 2.
    
 0.564
RTN4R
Reticulon 4 receptor.
    
 0.552
SALL3
Spalt like transcription factor 3.
   
  
 0.545
PITPNC1
Phosphatidylinositol transfer protein cytoplasmic 1.
    
 0.530
MFAP4
Microfibril associated protein 4.
    
 0.522
FAM20C
FAM20C golgi associated secretory pathway kinase.
   
  0.517
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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