STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMCC2Transmembrane and coiled-coil domain family 2. (712 aa)    
Predicted Functional Partners:
OR5M11
Olfactory receptor family 5 subfamily M member 11.
      
 0.687
RDH13
Retinol dehydrogenase 13; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
      
 0.687
HBS1L
HBS1 like translational GTPase.
      
 0.687
PROZ
Protein Z, vitamin K dependent plasma glycoprotein; Belongs to the peptidase S1 family.
      
 0.651
PEAR1
Platelet endothelial aggregation receptor 1.
      
 0.640
MYOZ3
Myozenin 3.
      
 0.622
ACAD11
Acyl-CoA dehydrogenase family member 11.
      
 0.598
PGM5
Phosphoglucomutase 5; Belongs to the phosphohexose mutase family.
      
 0.597
KLF1
Kruppel like factor 1.
   
  
 0.592
NAAA
N-acylethanolamine acid amidase; Belongs to the acid ceramidase family.
      
 0.575
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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