Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
UVSSAUV stimulated scaffold protein A. (697 aa)    
Predicted Functional Partners:
USP7
Ubiquitin specific peptidase 7; Belongs to the peptidase C19 family.
    
 0.994
ERCC8
ERCC excision repair 8, CSA ubiquitin ligase complex subunit.
    
 0.983
ERCC6
ERCC excision repair 6, chromatin remodeling factor.
    
 0.886
DDB1
Damage specific DNA binding protein 1.
    
 0.874
XAB2
XPA binding protein 2.
   
 
 0.835
OR2G2
Olfactory receptor.
      
 0.825
RBX1
Ring-box 1.
    
 0.818
MAEA
Macrophage erythroblast attacher.
 
 
  
 0.782
XPA
XPA, DNA damage recognition and repair factor.
     
 0.771
CUL4A
Cullin 4A; Belongs to the cullin family.
    
 0.756
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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