STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMEM92Transmembrane protein 92. (159 aa)    
Predicted Functional Partners:
ITCH
E3 ubiquitin-protein ligase.
    
   0.571
ALOX12B
Arachidonate 12-lipoxygenase, 12R type.
   
    0.518
FAM241B
Family with sequence similarity 241 member B.
   
    0.517
TMEM54
Transmembrane protein 54.
      
 0.466
GAL3ST1
Galactose-3-O-sulfotransferase 1.
      
 0.457
TSPAN15
Tetraspanin.
      
 0.441
TMEM119
Transmembrane protein 119.
   
    0.407
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.