STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIML2Tripartite motif family like 2. (427 aa)    
Predicted Functional Partners:
TTC16
Tetratricopeptide repeat domain 16.
   
  0.804
SWT1
SWT1 RNA endoribonuclease homolog.
    
 
 0.697
FRG1
FSHD region gene 1.
      
 0.672
MTNR1A
Melatonin receptor 1A; Belongs to the G-protein coupled receptor 1 family.
   
  
 0.632
BBOX1
Gamma-butyrobetaine hydroxylase 1.
      
 0.610
ZRANB2
Zinc finger Ran-binding domain-containing protein 2; May interfere with constitutive 5'-splice site selection. Belongs to the ZRANB2 family.
      
 0.575
ZMYM1
Zinc finger MYM-type containing 1.
    
 
 0.569
ID3
Inhibitor of DNA binding 3, HLH protein.
      
 0.568
ZNFX1
Zinc finger NFX1-type containing 1.
    
 
 0.565
DMRTB1
DMRT like family B with proline rich C-terminal 1.
    
 
 0.553
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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