Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LINGO4Leucine rich repeat and Ig domain containing 4. (666 aa)    
Predicted Functional Partners:
LRRC10
Uncharacterized protein.
  
     0.497
LRRC18
Leucine rich repeat containing 18.
  
     0.493
LRRC30
Leucine rich repeat containing 30.
  
     0.468
LRRC39
Leucine rich repeat containing 39.
  
     0.448
LRRC8E
Leucine rich repeat containing 8 VRAC subunit E.
  
     0.446
LRRIQ4
Leucine rich repeats and IQ motif containing 4.
  
     0.433
AK9
Uncharacterized protein.
    
  0.432
LRRC10B
Leucine rich repeat containing 10B.
  
     0.430
LRRC2
Leucine rich repeat containing 2.
  
     0.429
LRRC57
Leucine rich repeat containing 57.
  
     0.428
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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