STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOX13SRY-box 13. (615 aa)    
Predicted Functional Partners:
SHKBP1
SH3KBP1 binding protein 1.
      
 0.655
SOX5
SRY-box 5.
    
 
0.627
CPLX3
Complexin 3.
      
 0.624
LAMP5
Lysosomal associated membrane protein family member 5.
      
 0.622
CEP85
Centrosomal protein 85.
   
 
 0.558
TCF7
Transcription factor 7.
   
 
0.543
PRSS12
Serine protease 12; Belongs to the peptidase S1 family.
      
 0.511
TCF7L2
Transcription factor 7 like 2.
     
0.499
TCF7L1
Transcription factor 7 like 1.
     
0.499
LEF1
Lymphoid enhancer binding factor 1.
     
0.499
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.