STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TPRG1LTumor protein p63 regulated 1 like. (274 aa)    
Predicted Functional Partners:
PNMA2
PNMA family member 2.
      
 0.924
HAPLN4
Hyaluronan and proteoglycan link protein 4.
      
 0.790
SRSF2
RRM domain-containing protein.
   
 0.781
ABCF1
ATP binding cassette subfamily F member 1.
   
  
 0.758
DDX5
DEAD-box helicase 5; Belongs to the DEAD box helicase family.
   
 0.716
RBM8A
RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.
   
 0.706
SRSF9
Serine and arginine rich splicing factor 9.
   
 0.699
SRSF1
Serine and arginine rich splicing factor 1.
   
 0.699
EIF4A3
Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family.
   
 0.659
SNRNP35
Small nuclear ribonucleoprotein U11/U12 subunit 35.
   
 0.580
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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