STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2CD3C2 domain containing 3 centriole elongation regulator. (2342 aa)    
Predicted Functional Partners:
ABCA4
ATP binding cassette subfamily A member 4.
      
 0.897
COL12A1
Collagen type XII alpha 1 chain.
     
 0.894
CENPF
Centromere protein F.
      
 0.830
APOB
Apolipoprotein B.
      
 0.816
EVC
EvC ciliary complex subunit 1.
    
 0.780
ARL13B
ADP ribosylation factor like GTPase 13B.
      
 0.775
CCDC68
Coiled-coil domain containing 68.
      
 0.768
CCDC120
Coiled-coil domain containing 120.
      
 0.768
LRRC45
Leucine rich repeat containing 45.
     
 0.765
IFT88
Intraflagellar transport 88.
    
 
 0.757
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.