STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SWSAP1SWIM-type zinc finger 7 associated protein 1. (250 aa)    
Predicted Functional Partners:
ZSWIM7
Zinc finger SWIM-type containing 7.
   
 0.849
HSF2BP
Heat shock transcription factor 2 binding protein.
   
  
 0.840
FIGNL1
Fidgetin like 1; Belongs to the AAA ATPase family.
    
 
 0.828
XRCC3
DNA repair protein; Involved in the homologous recombination repair (HRR) pathway of double-stranded DNA, thought to repair chromosomal fragmentation, translocations and deletions; Belongs to the RecA family. RAD51 subfamily.
    
 
 0.794
MEIOB
Meiosis specific with OB-fold.
      
 0.792
RAD51D
DNA repair protein; Involved in the homologous recombination repair (HRR) pathway of double-stranded DNA breaks arising during DNA replication or induced by DNA-damaging agents; Belongs to the RecA family. RAD51 subfamily.
   
 
 0.782
BRCA2
BRCA2 DNA repair associated.
     
 0.759
RAD51B
RAD51 paralog B.
   
 
 0.748
SPIDR
Scaffold protein involved in DNA repair.
    
 
 0.742
RAD51C
RAD51 paralog C.
    
 
 0.704
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.