STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMX2H6 family homeobox 2. (273 aa)    
Predicted Functional Partners:
GRAMD1B
GRAM domain containing 1B.
      
 0.685
BUB3
BUB3 mitotic checkpoint protein.
 
    
 0.676
NXPH2
Neurexophilin; May be signaling molecules that resemble neuropeptides.
      
 0.671
PRDM14
PR/SET domain 14.
   
 0.486
GJA10
Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.
      
 0.481
LMO4
LIM domain only 4.
    
 
 0.463
PBX1
PBX homeobox 1.
   
 0.422
PBX3
PBX homeobox 3.
   
 0.422
PBX2
PBX homeobox 2.
   
 0.418
ACOT11
Acyl-CoA thioesterase 11.
      
 0.410
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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