STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGRNNeugrin, neurite outgrowth associated. (295 aa)    
Predicted Functional Partners:
FASTKD2
FAST kinase domains 2.
    
 
 0.871
PTCD1
Uncharacterized protein.
   
 
 0.858
RPUSD3
RNA pseudouridine synthase D3.
    
 
 0.848
GTPBP10
GTP binding protein 10.
   
  
 0.827
RPUSD4
RNA pseudouridine synthase D4.
    
 
 0.809
TRUB2
TruB pseudouridine synthase family member 2.
    
 
 0.769
DDX28
DEAD-box helicase 28.
    
 
 0.658
MRM3
Mitochondrial rRNA methyltransferase 3.
   
 
 0.621
MALSU1
Mitochondrial assembly of ribosomal large subunit 1.
   
  
 0.612
NSUN4
NOP2/Sun RNA methyltransferase 4; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
      
 0.568
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.