Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
SND1Staphylococcal nuclease domain-containing protein; Endonuclease that mediates miRNA decay of both protein-free and AGO2-loaded miRNAs. (947 aa)    
Predicted Functional Partners:
MTDH
Metadherin.
    
 
 0.908
RPS9
Ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.
    
 
 0.839
RPS20
Ribosomal protein S20.
    
   0.812
LRRC59
Uncharacterized protein.
   
 
 0.808
ENSECAP00000037344
Uncharacterized protein.
   
 
 0.808
RPS2
Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
   
 
 0.789
NUDCD1
NudC domain containing 1.
    
   0.783
DHX9
DExH-box helicase 9.
   
 0.746
ENSECAP00000026225
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
   
 
 0.722
ENSECAP00000038629
S5 DRBM domain-containing protein.
   
 
 0.722
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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