Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CPT1BSynaptonemal complex central element protein 3. (88 aa)    
Predicted Functional Partners:
SYCE1
Synaptonemal complex central element protein 1.
    
 0.986
SYCP1
Synaptonemal complex protein 1.
   
 0.954
TEX12
Testis expressed 12.
   
 0.950
SYCP3
Synaptonemal complex protein 3.
    
 0.918
STAG3
Stromal antigen 3.
     
 0.805
REC8
REC8 meiotic recombination protein.
     
 0.786
CCDC105
Coiled-coil domain containing 105.
      
 0.780
HORMAD1
HORMA domain containing 1.
   
  
 0.714
PRDM6
PR/SET domain 6.
    
 
 0.706
M1AP
Meiosis 1 associated protein.
      
 0.687
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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