Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
F6PQ40_HORSEProteasome subunit alpha type. (214 aa)    
Predicted Functional Partners:
PSMA4
Proteasome subunit alpha type.
  
0.999
PSMA3
Proteasome subunit alpha type.
  
0.999
PSMA5
Proteasome subunit alpha type.
  
0.999
PSMA2
Proteasome subunit alpha type.
   
0.999
PSMB2
Proteasome subunit beta.
   
 0.996
PSMB1
Proteasome subunit beta 1.
   
 0.996
PSMB4
Proteasome subunit beta 4.
   
 0.995
PSMA8
Proteasome subunit alpha type.
  
0.995
PSMA6
Proteasome subunit alpha type.
   
0.995
PSMA7
Proteasome subunit alpha type.
  
0.995
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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