RTRAF protein (Equus caballus) - STRING interaction network

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Predicted Interactions

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Score

RTRAF

RNA transcription, translation and transport factor. (244 aa)

Predicted Functional Partners:

DDX1

0.956

FAM98B

0.931

FAM98A

0.918

RTCB

0.918

C15H2orf49

0.866

FAM98C

0.778

LSM12

0.703

ZBTB8OS

0.649

STAU2

0.644

ELAVL4

0.639

Your Current Organism:

Equus caballus

NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C15H2orf49	DDX1	ENSECAP00000005270	ENSECAP00000052431	Chromosome 15 C2orf49 homolog.	DEAD-box helicase 1.	0.932
C15H2orf49	FAM98A	ENSECAP00000005270	ENSECAP00000019145	Chromosome 15 C2orf49 homolog.	Family with sequence similarity 98 member A.	0.908
C15H2orf49	FAM98B	ENSECAP00000005270	ENSECAP00000004919	Chromosome 15 C2orf49 homolog.	Family with sequence similarity 98 member B.	0.976
C15H2orf49	FAM98C	ENSECAP00000005270	ENSECAP00000027500	Chromosome 15 C2orf49 homolog.	Family with sequence similarity 98 member C.	0.575
C15H2orf49	RTCB	ENSECAP00000005270	ENSECAP00000021424	Chromosome 15 C2orf49 homolog.	RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs.	0.974
C15H2orf49	RTRAF	ENSECAP00000005270	ENSECAP00000010505	Chromosome 15 C2orf49 homolog.	RNA transcription, translation and transport factor.	0.866
C15H2orf49	ZBTB8OS	ENSECAP00000005270	ENSECAP00000018514	Chromosome 15 C2orf49 homolog.	Zinc finger and BTB domain containing 8 opposite strand.	0.735
DDX1	C15H2orf49	ENSECAP00000052431	ENSECAP00000005270	DEAD-box helicase 1.	Chromosome 15 C2orf49 homolog.	0.932
DDX1	ELAVL4	ENSECAP00000052431	ENSECAP00000051328	DEAD-box helicase 1.	ELAV-like protein; Belongs to the RRM elav family.	0.524
DDX1	FAM98A	ENSECAP00000052431	ENSECAP00000019145	DEAD-box helicase 1.	Family with sequence similarity 98 member A.	0.969
DDX1	FAM98B	ENSECAP00000052431	ENSECAP00000004919	DEAD-box helicase 1.	Family with sequence similarity 98 member B.	0.964
DDX1	FAM98C	ENSECAP00000052431	ENSECAP00000027500	DEAD-box helicase 1.	Family with sequence similarity 98 member C.	0.801
DDX1	RTCB	ENSECAP00000052431	ENSECAP00000021424	DEAD-box helicase 1.	RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs.	0.947
DDX1	RTRAF	ENSECAP00000052431	ENSECAP00000010505	DEAD-box helicase 1.	RNA transcription, translation and transport factor.	0.956
DDX1	ZBTB8OS	ENSECAP00000052431	ENSECAP00000018514	DEAD-box helicase 1.	Zinc finger and BTB domain containing 8 opposite strand.	0.744
ELAVL4	DDX1	ENSECAP00000051328	ENSECAP00000052431	ELAV-like protein; Belongs to the RRM elav family.	DEAD-box helicase 1.	0.524
ELAVL4	FAM98A	ENSECAP00000051328	ENSECAP00000019145	ELAV-like protein; Belongs to the RRM elav family.	Family with sequence similarity 98 member A.	0.617
ELAVL4	FAM98B	ENSECAP00000051328	ENSECAP00000004919	ELAV-like protein; Belongs to the RRM elav family.	Family with sequence similarity 98 member B.	0.595
ELAVL4	RTCB	ENSECAP00000051328	ENSECAP00000021424	ELAV-like protein; Belongs to the RRM elav family.	RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs.	0.564
ELAVL4	RTRAF	ENSECAP00000051328	ENSECAP00000010505	ELAV-like protein; Belongs to the RRM elav family.	RNA transcription, translation and transport factor.	0.639