STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PNLDC1PARN like, ribonuclease domain containing 1. (531 aa)    
Predicted Functional Partners:
PARN
Poly(A)-specific ribonuclease.
  
  
0.918
TDRKH
Tudor and KH domain containing.
      
 0.915
HENMT1
HEN methyltransferase 1.
      
 0.855
DCP2
Decapping mRNA 2.
     
 0.853
TDRD5
Tudor domain containing 5.
      
 0.838
PLD6
Phospholipase D family member 6.
      
 0.831
MOV10L1
Mov10 like RISC complex RNA helicase 1.
      
 0.685
KHNYN
KH and NYN domain containing.
      
 0.650
EXOSC7
Exosome component 7.
     
 0.595
DHX30
DExH-box helicase 30.
   
 
 0.582
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.