STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORMDL1ORM1-like protein; Negative regulator of sphingolipid synthesis. (153 aa)    
Predicted Functional Partners:
SPTLC1
Serine palmitoyltransferase long chain base subunit 1.
    
 0.908
SPTLC3
Serine palmitoyltransferase long chain base subunit 3.
    
 0.870
SPTLC2
Serine palmitoyltransferase long chain base subunit 2.
    
 0.866
SPTSSA
Serine palmitoyltransferase small subunit A.
    
 0.860
TMED9
Transmembrane p24 trafficking protein 9.
   
 
 0.728
PMS1
PMS1 homolog 1, mismatch repair system component.
   
  
 0.699
MFSD6
Major facilitator superfamily domain containing 6.
      
 0.691
NUDCD3
NudC domain containing 3.
   
  
 0.684
WDR75
WD repeat domain 75.
   
  
 0.677
FAM110B
Family with sequence similarity 110 member B.
      
 0.674
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.