Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DCP1B | DCPS | ENSECAP00000043770 | ENSECAP00000010836 | Decapping mRNA 1B. | Decapping enzyme, scavenger. | 0.676 |
DCP1B | LSM12 | ENSECAP00000043770 | ENSECAP00000007077 | Decapping mRNA 1B. | LSM12 homolog. | 0.547 |
DCP1B | TSEN2 | ENSECAP00000043770 | ENSECAP00000010614 | Decapping mRNA 1B. | tRNA-splicing endonuclease subunit Sen2; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structural [...] | 0.708 |
DCPS | DCP1B | ENSECAP00000010836 | ENSECAP00000043770 | Decapping enzyme, scavenger. | Decapping mRNA 1B. | 0.676 |
DCPS | GALE | ENSECAP00000010836 | ENSECAP00000044718 | Decapping enzyme, scavenger. | UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. | 0.577 |
DCPS | HRH3 | ENSECAP00000010836 | ENSECAP00000006167 | Decapping enzyme, scavenger. | Histamine receptor H3; Belongs to the G-protein coupled receptor 1 family. | 0.593 |
DCPS | LSM12 | ENSECAP00000010836 | ENSECAP00000007077 | Decapping enzyme, scavenger. | LSM12 homolog. | 0.602 |
DCPS | MRPL3 | ENSECAP00000010836 | ENSECAP00000014303 | Decapping enzyme, scavenger. | Mitochondrial ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family. | 0.662 |
DCPS | MRRF | ENSECAP00000010836 | ENSECAP00000029289 | Decapping enzyme, scavenger. | Mitochondrial ribosome recycling factor. | 0.624 |
DCPS | POLR3K | ENSECAP00000010836 | ENSECAP00000022478 | Decapping enzyme, scavenger. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | 0.644 |
DCPS | SSR1 | ENSECAP00000010836 | ENSECAP00000031466 | Decapping enzyme, scavenger. | Signal sequence receptor subunit 1. | 0.586 |
DCPS | TSEN2 | ENSECAP00000010836 | ENSECAP00000010614 | Decapping enzyme, scavenger. | tRNA-splicing endonuclease subunit Sen2; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structural [...] | 0.741 |
DCPS | ZNF207 | ENSECAP00000010836 | ENSECAP00000033675 | Decapping enzyme, scavenger. | Zinc finger protein 207. | 0.637 |
GALE | DCPS | ENSECAP00000044718 | ENSECAP00000010836 | UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. | Decapping enzyme, scavenger. | 0.577 |
HRH3 | DCPS | ENSECAP00000006167 | ENSECAP00000010836 | Histamine receptor H3; Belongs to the G-protein coupled receptor 1 family. | Decapping enzyme, scavenger. | 0.593 |
LSM12 | DCP1B | ENSECAP00000007077 | ENSECAP00000043770 | LSM12 homolog. | Decapping mRNA 1B. | 0.547 |
LSM12 | DCPS | ENSECAP00000007077 | ENSECAP00000010836 | LSM12 homolog. | Decapping enzyme, scavenger. | 0.602 |
LSM12 | SSR1 | ENSECAP00000007077 | ENSECAP00000031466 | LSM12 homolog. | Signal sequence receptor subunit 1. | 0.481 |
LSM12 | TSEN2 | ENSECAP00000007077 | ENSECAP00000010614 | LSM12 homolog. | tRNA-splicing endonuclease subunit Sen2; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structural [...] | 0.615 |
MRPL3 | DCPS | ENSECAP00000014303 | ENSECAP00000010836 | Mitochondrial ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family. | Decapping enzyme, scavenger. | 0.662 |
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