STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCDH20Uncharacterized protein. (952 aa)    
Predicted Functional Partners:
B3GNT7
Hexosyltransferase.
   
 
 0.680
EGFL8
EGF like domain multiple 8.
      
 0.660
GUCA2A
Guanylate cyclase activator 2A.
      
 0.632
TMEM108
Transmembrane protein 108.
   
  
 0.626
BRICD5
BRICHOS domain containing 5.
      
 0.579
CACHD1
Cache domain containing 1.
   
  
 0.568
SCAPER
S-phase cyclin A associated protein in the ER.
      
 0.566
AGA
Aspartylglucosaminidase.
   
  
 0.565
LOC111767399
TRIO and F-actin binding protein.
      
 0.562
GNPNAT1
Glucosamine 6-phosphate N-acetyltransferase.
   
  
 0.541
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.