STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DPPA4Developmental pluripotency associated 4. (309 aa)    
Predicted Functional Partners:
GDF3
Growth differentiation factor 3.
   
  
 0.726
NANOG
Homeobox domain-containing protein.
   
 
 0.660
UTF1
Uncharacterized protein.
   
  
 0.659
ZFP42
ZFP42 zinc finger protein.
   
  
 0.658
LIN28A
Lin-28 homolog A.
   
  
 0.636
POU5F1
POU domain protein.
   
 0.618
SALL4
Spalt like transcription factor 4.
   
  
 0.602
FBXO15
F-box protein 15.
   
  
 0.564
ESRRB
Estrogen related receptor beta.
   
  
 0.562
CHPT1
Choline phosphotransferase 1; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
      
 0.560
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.