STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM230UPF0414 transmembrane protein C20orf30-like protein-like protein. (119 aa)    
Predicted Functional Partners:
PNKD
PNKD metallo-beta-lactamase domain containing.
    
 
 0.956
SLC35D3
Solute carrier family 35 member D3.
      
 0.954
PCDH10
Protocadherin 10.
      
 0.770
CCDC88A
Coiled-coil domain containing 88A.
   
  
 0.672
KIAA1324
KIAA1324.
      
 0.651
BTBD7
BTB domain containing 7.
      
 0.567
DNAJC13
DnaJ heat shock protein family (Hsp40) member C13.
   
  
 0.555
RAB39B
RAB39B, member RAS oncogene family.
      
 0.475
ALLC
Allantoicase.
      
 0.471
SMCO4
Single-pass membrane protein with coiled-coil domains 4.
      
 0.471
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.