STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DPPA2Developmental pluripotency associated 2. (319 aa)    
Predicted Functional Partners:
TMEM154
Transmembrane protein 154.
      
 0.689
UTF1
Uncharacterized protein.
      
 0.649
NANOG
Homeobox domain-containing protein.
   
  
 0.630
PRDM14
PR/SET domain 14.
      
 0.627
GDF3
Growth differentiation factor 3.
   
  
 0.605
SALL4
Spalt like transcription factor 4.
   
  
 0.595
ESRRB
Estrogen related receptor beta.
      
 0.575
TMEM38A
Transmembrane protein 38A.
      
 0.561
ZFP42
ZFP42 zinc finger protein.
   
  
 0.537
LIN28A
Lin-28 homolog A.
   
  
 0.537
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.