STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSD2Pleckstrin and Sec7 domain containing 2. (775 aa)    
Predicted Functional Partners:
SLC45A1
Solute carrier family 45 member 1.
   
  
 0.780
LOC111767487
Anaphase promoting complex subunit 1.
      
 0.768
ANAPC1
Anaphase promoting complex subunit 1.
      
 0.768
OIP5
Mis18 domain-containing protein.
   
  
 0.761
RP1L1-2
Uncharacterized protein.
    
 
 0.758
CXXC5
CXXC finger protein 5.
 
    
 0.748
SYT8
Synaptotagmin 8.
   
  
 0.716
REEP6
Receptor expression-enhancing protein.
      
 0.688
RERE
Arginine-glutamic acid dipeptide repeats.
   
  
 0.672
MAP4
Microtubule-associated protein.
   
  
 0.658
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.