STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COL28A1Collagen type XXVIII alpha 1 chain. (1127 aa)    
Predicted Functional Partners:
PXK
PX domain containing serine/threonine kinase like.
    
 
 0.672
RGL2
Ral guanine nucleotide dissociation stimulator like 2.
      
 0.635
ANGPTL7
Angiopoietin like 7.
    
 0.621
COL26A1
Collagen type XXVI alpha 1 chain.
    
 0.596
PLOD3
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3.
    
 0.571
TPST1
Protein-tyrosine sulfotransferase; Catalyzes the O-sulfation of tyrosine residues within acidic motifs of polypeptides, using 3'-phosphoadenylyl sulfate (PAPS) as cosubstrate; Belongs to the protein sulfotransferase family.
    
 0.555
KIAA1324L
KIAA1324 like.
      
 0.551
LAMB2
Laminin subunit beta 2.
   
 0.546
P4HB
Protein disulfide-isomerase.
   
 0.539
SAMD9L
Sterile alpha motif domain containing 9 like.
   
 0.538
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.