STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBM39RNA binding motif protein 39. (530 aa)    
Predicted Functional Partners:
RBM25
RNA binding motif protein 25.
   
0.944
DDX5
DEAD-box helicase 5; Belongs to the DEAD box helicase family.
   
 0.931
EMD
Emerin.
   
 
 0.917
LUC7L3
LUC7 like 3 pre-mRNA splicing factor.
   
 0.907
RBM6
RNA binding motif protein 6.
   
 0.902
PRPF40A
Pre-mRNA processing factor 40 homolog A.
   
  0.891
SRRT
Serrate, RNA effector molecule.
   
 0.885
RBM7
RRM domain-containing protein.
   
 0.883
SF1
Splicing factor 1.
   
 0.883
DCAF15
DDB1 and CUL4 associated factor 15.
    
 
 0.875
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.