STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TXLNGTaxilin gamma. (734 aa)    
Predicted Functional Partners:
SNX19
Sorting nexin 19.
      
 0.769
STX4
Syntaxin 4; Belongs to the syntaxin family.
   
 0.754
STX3
Syntaxin 3; Belongs to the syntaxin family.
    
 0.737
ZDHHC21
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
   
  
 0.718
CREG1
Cellular repressor of E1A stimulated genes 1; Belongs to the CREG family.
      
 0.698
SLC9B2
Solute carrier family 9 member B2.
      
 0.692
CHMP1A
Charged multivesicular body protein 1A.
      
 0.684
NDRG3
NDRG family member 3.
   
  
 0.673
ZFP1
ZFP1 zinc finger protein.
    
 
 0.671
KIAA1210
KIAA1210.
   
  
 0.664
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.