STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC40Coiled-coil domain containing 40. (1140 aa)    
Predicted Functional Partners:
CCDC114
Coiled-coil domain containing 114.
   
  
 0.893
CCDC39
Coiled-coil domain containing 39.
   
 
 0.872
TTC29
Tetratricopeptide repeat domain 29.
   
 
 0.853
DNAI2
Dynein axonemal intermediate chain 2.
   
  
 0.850
RSPH4A
Radial spoke head component 4A.
   
 
 0.842
AK7
Adenylate kinase 7.
   
 
 0.839
RSPH9
Uncharacterized protein.
   
  
 0.836
CCDC103
Coiled-coil domain containing 103.
      
 0.832
DNAH11
Dynein axonemal heavy chain 11.
   
 
 0.825
DRC3
Dynein regulatory complex subunit 3.
   
 
 0.809
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.