STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLK2Secretory carrier-associated membrane protein. (911 aa)    
Predicted Functional Partners:
PHF12
PHD finger protein 12.
   
   0.610
SRSF12
Serine and arginine rich splicing factor 12.
   
 
 0.579
RSRP1
Arginine and serine rich protein 1.
   
 
 0.572
CLK3
CDC like kinase 3.
  
  
0.571
CDKN3
Cyclin-dependent kinase inhibitor 3; May play a role in cell cycle regulation. Dual specificity phosphatase active toward substrates containing either phosphotyrosine or phosphoserine residues.
    
 
 0.524
BCLAF1
BCL2 associated transcription factor 1.
   
 
 0.508
RBBP6
RB binding protein 6, ubiquitin ligase.
   
   0.500
SNIP1
Smad nuclear interacting protein 1.
   
   0.496
SFSWAP
Splicing factor SWAP.
   
  
 0.482
TNKS2
Poly [ADP-ribose] polymerase.
    
 
 0.477
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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