STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMAT2Zinc finger matrin-type 2. (199 aa)    
Predicted Functional Partners:
MFAP1
Microfibrillar-associated protein 1-like protein.
   
 0.998
PRPF38A
Pre-mRNA processing factor 38A.
   
 0.996
PRPF6
Pre-mRNA processing factor 6.
   
 0.993
SART1
Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP.
    
 0.987
TXNL4A
Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family.
    
 0.985
SMU1
SMU1 DNA replication regulator and spliceosomal factor.
    
 0.979
LSM7
LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.
   
 0.978
WBP4
WW domain binding protein 4.
   
 0.976
PRPF3
Pre-mRNA processing factor 3.
   
 0.976
TCERG1
Transcription elongation regulator 1.
   
  0.975
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.