STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PXDC1PX domain containing 1. (371 aa)    
Predicted Functional Partners:
SUPT3H
SPT3 homolog, SAGA and STAGA complex component.
      
 0.704
UROC1
Urocanate hydratase 1.
      
 0.620
FAM207A
Family with sequence similarity 207 member A.
      
 0.602
EXOSC10
Exosome component 10.
      
 0.592
SMYD3
SET and MYND domain containing 3.
      
 0.589
DCP1B
Decapping mRNA 1B.
      
 0.581
PRPF4B
Pre-mRNA processing factor 4B.
   
  
 0.580
ADCK1
AarF domain containing kinase 1.
   
  
 0.573
CALHM3
Calcium homeostasis modulator 3.
      
 0.573
PTTG1IP
PTTG1 interacting protein.
   
  
 0.569
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.