STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC45A1Solute carrier family 45 member 1. (797 aa)    
Predicted Functional Partners:
PSD2
Pleckstrin and Sec7 domain containing 2.
   
  
 0.780
SLC16A8
Solute carrier family 16 member 8.
   
  
 0.772
LOC111767487
Anaphase promoting complex subunit 1.
      
 0.763
ANAPC1
Anaphase promoting complex subunit 1.
      
 0.763
OIP5
Mis18 domain-containing protein.
      
 0.752
PRSS53
Serine protease 53; Belongs to the peptidase S1 family.
   
  
 0.698
RERE
Arginine-glutamic acid dipeptide repeats.
      
 0.686
TCHHL1
Trichohyalin like 1.
   
  
 0.684
CSPG5
SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1.
   
 
 0.668
CXXC5
CXXC finger protein 5.
      
 0.646
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.