STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM54Transmembrane protein 54. (223 aa)    
Predicted Functional Partners:
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.696
ZNF518B
C2H2-type domain-containing protein.
    
 0.528
TSPYL5
TSPY like 5; Belongs to the nucleosome assembly protein (NAP) family.
    
 
 0.497
SLC16A5
Solute carrier family 16 member 5.
    
 
 0.484
TMEM126B
Transmembrane protein 126B.
      
 0.483
TMEM134
Transmembrane protein 134.
      
 0.482
TRIM26
Tripartite motif containing 26.
   
 0.478
LYG1
Lysozyme g-like protein; Belongs to the glycosyl hydrolase 23 family.
      
 0.477
ENSECAP00000025046
Uncharacterized protein.
      
 0.475
SERF2
4F5 domain-containing protein.
      
 0.475
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.