STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM44Transmembrane protein 44. (438 aa)    
Predicted Functional Partners:
LSG1
Large 60S subunit nuclear export GTPase 1.
      
 0.483
SNRNP48
Small nuclear ribonucleoprotein U11/U12 subunit 48.
      
 0.481
DPF3
Double PHD fingers 3.
      
 0.477
RUFY4
RUN and FYVE domain containing 4.
      
 0.476
PPP1R18
Protein phosphatase 1 regulatory subunit 18.
      
 0.476
DPYSL5
Dihydropyrimidinase like 5.
      
 0.471
RASSF8
Ras association domain family member 8.
      
 0.471
CITED4
Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 4.
      
 0.470
RHOBTB2
Rho related BTB domain containing 2.
      
 0.443
NOP53
NOP53 ribosome biogenesis factor.
      
 0.443
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.