STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PKD1L3Polycystin 1 like 3, transient receptor potential channel interacting. (1652 aa)    
Predicted Functional Partners:
PKD2L1
Polycystin 2 like 1, transient receptor potential cation channel.
    
 
0.920
TRPM5
Transient receptor potential cation channel subfamily M member 5.
   
  
 0.919
PKD1L2
Uncharacterized protein.
 
    
0.904
TAS1R3
Taste 1 receptor member 3.
      
 0.737
PRSS37
Serine protease 37.
      
 0.705
PKD2
Polycystin 2, transient receptor potential cation channel.
    
 
0.700
TRPV1
Transient receptor potential cation channel subfamily V member 1; Belongs to the transient receptor (TC 1.A.4) family.
   
  
 0.647
TRPM4
Transient receptor potential cation channel subfamily M member 4.
   
  
 0.591
TRPM3
Transient receptor potential cation channel subfamily M member 3.
   
  
 0.555
TRPM8
Transient receptor potential cation channel subfamily M member 8.
   
  
 0.554
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.