STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NVLNuclear VCP like. (856 aa)    
Predicted Functional Partners:
MTREX
Mtr4 exosome RNA helicase.
   
 0.920
RBM28
RNA binding motif protein 28.
   
  
 0.916
UBXN7
UBX domain protein 7.
   
 0.916
DDX56
DEAD-box helicase 56.
   
 
 0.891
NOM1
Nucleolar protein with MIF4G domain 1.
   
    0.886
NOC3L
Nucleolar complex protein 3 homolog.
   
  
 0.863
WDR74
WD repeat domain 74.
   
 0.817
RPF2
Brix domain-containing protein 1-like protein.
   
 
 0.809
BOP1
Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 
 0.792
GNL3L
G protein nucleolar 3 like.
   
 0.786
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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