STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FBXO47F-box protein 47. (451 aa)    
Predicted Functional Partners:
DYDC1
DPY30 domain containing 1.
   
  
 0.858
C2H1orf109
Chromosome 2 C1orf109 homolog.
   
    0.815
CALHM4
Calcium homeostasis modulator family member 4.
   
    0.672
CALHM2
Calcium homeostasis modulator family member 2.
   
    0.672
LIX1
Limb and CNS expressed 1.
   
    0.671
THAP6
THAP domain containing 6.
   
    0.668
C21H5orf22
Chromosome 21 C5orf22 homolog.
   
    0.667
ACOT11
Acyl-CoA thioesterase 11.
   
    0.666
IGFBPL1
Insulin like growth factor binding protein like 1.
   
    0.666
SP100
SP100 nuclear antigen.
   
    0.666
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.