STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NUDT6Nudix hydrolase 6; Belongs to the Nudix hydrolase family. (313 aa)    
Predicted Functional Partners:
SLC17A5
Solute carrier family 17 member 5.
   
  
 0.635
NUDT5
Nudix hydrolase 5; Belongs to the Nudix hydrolase family.
      
 0.621
NUDT4
Nudix hydrolase 4.
      
 0.612
NUDT3
Nudix hydrolase 3.
      
 0.603
NUDT2
Nudix hydrolase 2.
   
  
 0.600
NUDT22
Nudix hydrolase 22.
   
  
 0.584
NUDT18
Nudix hydrolase 18; Belongs to the Nudix hydrolase family.
      
 0.584
NUDT17
Nudix hydrolase 17.
   
  
 0.582
NUDT21
Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]
   
  
 0.578
NUDT12
Nudix hydrolase 12.
      
 0.571
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.